Insertion junction: CLIP2.002213_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002213
Chromosome:chromosome 12
Location:3485084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497101 (1 of 1) 3.1.26.8 - Ribonuclease M5 / RNase M5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTCCAGCCTCCAACGCAAGCACAGTAGACACCAGGCTCCAGCGGGCG
Internal bar code:GTTGTTTGCAAGTCCATATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTTACGAGCACGAGCAA
Suggested primer 2:TCGGGAGCCCTGTAACAAAC