Insertion junction: CLIP2.002214_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002214
Chromosome:chromosome 2
Location:295520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074950 (1 of 5) PTHR10351//PTHR10351:SF42 - TRANSCRIPTION FACTOR BTF3 // LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTAACCACACCACCCCTCGTGCATCTCATTGAAAGCGACAGCTCTTC
Internal bar code:CTTTGACTGTGGGACGCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3188
LEAP-Seq percent confirming:95.5056
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAATGGTGATGGTGGT
Suggested primer 2:GCGCGTTTCCTTTCAACACT