Insertion junction: CLIP2.002218_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002218
Chromosome:chromosome 7
Location:5071245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347850 (1 of 1) PF08123 - Histone methylation protein DOT1 (DOT1) 3'UTR
Cre07.g347900 (1 of 2) IPR001680//IPR001810//IPR017986 - WD40 repeat // F-box domain // WD40-repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCCTGCAGACTCGTCGCACTCGCTCGGCCACACAGCCGCGACGGCG
Internal bar code:CCACAGGTTCCGATAGCGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTGGGAGGCTGATCAA
Suggested primer 2:TCTATTGTTGCTGCTGGCGA