Insertion junction: CLIP2.002224_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002224
Chromosome:chromosome 6
Location:2645181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270300 (1 of 1) PTHR13271//PTHR13271:SF36 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGTTACACACCGGCCCCTACCCCACGCGCGGCATACCTGCTGTCCTT
Internal bar code:GTCGGCATATGATTAGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3752
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACTTCACCCAAGCCAT
Suggested primer 2:TCTCGCATATGCCCACAGTC