Insertion junction: CLIP2.002229_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002229
Chromosome:chromosome 2
Location:113241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073900 (1 of 2) 1.13.11.69 - Carlactone synthase 3'UTR
Cre02.g074000 POC18 Proteome of centriole protein 18; (1 of 1) PTHR19853//PTHR19853:SF1 - WD REPEAT CONTAINING PROTEIN 3 WDR3 // TBC1 DOMAIN FAMILY MEMBER 31 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCGTCAGGACGAGCCCGTACCAGGGAGCTGGCCATCCAACGCACTG
Internal bar code:TTTAAAAATTGTTATCCGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2826
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTTCCCAGCAGGTGAG
Suggested primer 2:CCTACCGCTACTGCTACAGC