Insertion junction: CLIP2.002230_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002230
Chromosome:chromosome 1
Location:5208639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036350 PMA1 (1 of 5) K01537 - Ca2+-transporting ATPase (E3.6.3.8); Related to plasma membrane P-type and chloroplast type calcium ATPases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCTTGCATTCCCTGCACACACACACACATACACACACACACGCGTA
Internal bar code:CGCGTTGGTTTAAAGACCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTTCGACCAGGAAAG
Suggested primer 2:TAACCCACCCGCATCAGTTC