Insertion junction: CLIP2.002237_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002237
Chromosome:chromosome 17
Location:2888823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718950 RCA2 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACAAGATACGACCCCTGATCGCTGCGCTCGGGGGGCTCAGCCAAATA
Internal bar code:GATACGTTCTAAGGCTAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGCACATGTGTTTGCTC
Suggested primer 2:TCCTATGCACCCTGTAGCCT