Insertion junction: CLIP2.002249_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002249
Chromosome:chromosome 12
Location:6149626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAATCCCGCCAACGCAGCCGCCCAGTCTGGCCCGAAAGTGATCGCTG
Internal bar code:CTCATACTTCTTACACAAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGCTCTTCAAGGGCTGC
Suggested primer 2:AATGTCGCAGCGAAGAAAGC