Insertion junction: CLIP2.002252_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002252
Chromosome:chromosome 15
Location:5411184
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g733950 CGL152 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGCGGGGATGCTGGCAGCCGGCACACACAGACACGCAGCCCGGTCA
Internal bar code:GCACAGTTTTGTATGACAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAATTGACGAGCTGCGC
Suggested primer 2:ATGGTCATGTGCCAGGACAG