Insertion junction: CLIP2.002254_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002254
Chromosome:chromosome 2
Location:2015856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088450 CPLD29 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR22999:SF18 - PX DOMAIN-CONTAINING PROTEIN KINASE-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGAAGCGCCGCGCCACCGTCCACTCCCGCGGCCCCGCCGCCTCCT
Internal bar code:AGGGCAAAAGCTCGTCTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACATCGCTTCGGAATTC
Suggested primer 2:CAGGGACTTGAAGCTGAGGG