Insertion junction: CLIP2.002256_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002256
Chromosome:chromosome 2
Location:5142946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111650 CGL8 (1 of 2) PTHR10783//PTHR10783:SF44 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SPX DOMAIN-CONTAINING PROTEIN 1-RELATED; SPX containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCGGGCGGGAAGTTGCTTGAGCTGCTTCTTCAGGTGCTTATAGATA
Internal bar code:CGCGTGGGCGCGGGGGATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2296
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTGCTCGTATACCGTGG
Suggested primer 2:CTTGCACAAACAGGGAACGG