Insertion junction: CLIP2.002262_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002262
Chromosome:chromosome 17
Location:3508783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724300 PSAK1,PSAK Photosystem I reaction center subunit K; (1 of 1) K02698 - photosystem I subunit X (psaK) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTACACATCTTGCCCTGTGTCCTTGCATATTTTTGTACTGCACTACG
Internal bar code:GTTGCAGAACGCCTCAGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2045
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCCTTGTGCATGTAGA
Suggested primer 2:TTCTCGCACGTTGCTACTGT