Insertion junction: CLIP2.002264_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002264
Chromosome:chromosome 6
Location:1941995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACATCCGTCCTGGGCTAGAGCTGCGGGAGCCCTGCTTTCCGTGGGCA
Internal bar code:CGGGTGCCGGTTTTCAGTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGGCACCTCATTCCACC
Suggested primer 2:TGGATACAGGGCAATGCGTT