Insertion junction: CLIP2.002274_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002274
Chromosome:chromosome 12
Location:8550195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549050 STR1 Strictosidine synthase; (1 of 1) 4.3.3.2 - Strictosidine synthase / Strictosidine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAGCGACAACGTAGCGTGCCATTTGTGCACCCCGTGGGAGTGTGCGG
Internal bar code:ATGCTTCAAGATTTGTGATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCTGTGGAAGAAGTGT
Suggested primer 2:GGCGCATGTCAGCACTAATG