Insertion junction: CLIP2.002277_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002277
Chromosome:chromosome 13
Location:3405811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586750 (1 of 239) IPR016024 - Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCTCCCAACTCAGACATTCAACAAGTGCAGTTCCTGGTTCTATTTT
Internal bar code:ATTGTTAGTATCCGACACTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGCAGCCAGTGGTCTG
Suggested primer 2:AGGTCTCTAGCGACTGAGCA