Insertion junction: CLIP2.002282_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002282
Chromosome:chromosome 6
Location:1928199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264400 (1 of 1) PTHR13992:SF7 - SMRTER, ISOFORM G CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGACCGCCGGCCCAGTGGCATGACGGGCGGCAGCACAGGCGCCGCCG
Internal bar code:TGGTGGGTTCTGCGTTTTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATGCTAAGGCTGCTCTT
Suggested primer 2:AGCGCACTCCATCCTTGAC