Insertion junction: CLIP2.002286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002286
Chromosome:chromosome 9
Location:5796506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411200 PSB33,TEF5,LIL8 PSII assembly protein; (1 of 1) PTHR21496:SF0 - RIESKE DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCGCTGACAAAACATAACATGTACTGTTGCAGTTGAGGTGAAGCCTG
Internal bar code:GATTACGCGTTCAATGACCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGATAGAGCCGTCCTTGAGC
Suggested primer 2:GACACAGCTTCCAGAGGACC