Insertion junction: CLIP2.002303_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002303
Chromosome:chromosome 13
Location:2935647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583600 DGD1 Digalactosyldiacylglycerol synthase; (1 of 1) 2.4.1.241 - Digalactosyldiacylglycerol synthase / UDP-galactose:MGDG galactosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGACGGTCATTCTGACGCGTAATCGGGCCTCTGATACAAAGCTTCGG
Internal bar code:ACAACTGCTTCGATGTGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3601
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAATTGCGCCCCAAACAG
Suggested primer 2:GACCGAGAGATGATGGCCTG