Insertion junction: CLIP2.002312_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002312
Chromosome:chromosome 17
Location:3688262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGAAGGCTGAACGGGGCTGTGACACGTGCTAACTGCACGGGGCCGTT
Internal bar code:TTGTGCAGTAGTTTTAGAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAACCGTGTGAAACCGTG
Suggested primer 2:ATGAAGATGCCTGACGCCAA