Insertion junction: CLIP2.002323_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002323
Chromosome:chromosome 6
Location:4013259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGGCCCCTGACCACGTGGCACTCGGACCCGCAGGCGCTGGTGCTGCC
Internal bar code:TAATCCGGCCCCAGTCCGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGCATGATACAAAGGG
Suggested primer 2:GGATAGACGGGCTCTTGCTC