Insertion junction: CLIP2.002334_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002334
Chromosome:chromosome 6
Location:2238028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266850 (1 of 1) PTHR10071:SF199 - GATA-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGCTGGCGTGTTGCGCTGGCGGCTCGTCCCCCGGCTTGAACGCACC
Internal bar code:GTCGCGTCAAATTAGGGCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3196
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAATGTCCGCTTGCGAGC
Suggested primer 2:GGCTCGACATCTCTCTTCCG