Insertion junction: CLIP2.002334_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002334
Chromosome:chromosome 9
Location:2725828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTACCTTGCTACCCGCGCGAGAAAGGCTTACGCATGCGGTGAAAGTCA
Internal bar code:GTGTCGGCGGTGCCCGTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACTCGTCCTCTTGTGCC
Suggested primer 2:TTTGTTGCAGCTCCCATTGC