Insertion junction: CLIP2.002335_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002335
Chromosome:chromosome 3
Location:1516313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151700 CGL26 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCGAGTACCGTAGCTGTCGCCATCGGTGCAAAACGGCCGCAGGATG
Internal bar code:GCGCATTCACGCGATATTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGCCTTCAGGAACTCCG
Suggested primer 2:GCTTTCTGTGGGTGCTTTGG