Insertion junction: CLIP2.002336_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002336
Chromosome:chromosome 9
Location:6561270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416200 HCF107,MBB1 PsbB mRNA maturation factor; (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCGGGTGCGCAGGTACGTGCACCTGGCCTGGGCGCTGTGGGAGCGC
Internal bar code:AGTACATACGAATCCCACCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCGTGACCCTCCGATC
Suggested primer 2:GGTGTCTTCAGGGCATCCAA