Insertion junction: CLIP2.002339_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002339
Chromosome:chromosome 3
Location:7228333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207750 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCCCCAGCGGTGCGTATGGAGGCGAGGGCGGTGATGGCGGCGGCTA
Internal bar code:GTCCCTTGGACAGAGTTGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGTCCATGTCCCGTAG
Suggested primer 2:TGTACCAAACGTTGCGCTTG