Insertion junction: CLIP2.002342_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002342
Chromosome:chromosome 16
Location:2605409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661100 MAPK7 (1 of 1) K08829 - male germ cell-associated kinase [EC:2.7.11.22] (MAK); Mitogen-Activated Protein Kinase 3'UTR
Cre16.g661150 CGL5 Conserved in the Green Lineage; (1 of 2) 5.2.1.14 - Beta-carotene isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTATAGAGTGGTTGGGCAGTCAATGTGGTGCCCAATGACAATCCGGTC
Internal bar code:CCGAGGCTGAGGGCTGCACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4275
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGACTCGAGGGTGTGAC
Suggested primer 2:TTCCTTTGACCAGGCTCGTC