Insertion junction: CLIP2.002343_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002343
Chromosome:chromosome 4
Location:1416948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214250 AGO2 Argonaute-like protein; (1 of 3) PTHR22891:SF0 - PROTEIN ARGONAUTE-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTACCAATGCGCCTGGCTACAACTCTTCTTCTCATGTGTTTTGAATGT
Internal bar code:TTTGTGTATGGACCCGGGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAAAGATGGTTGGCAA
Suggested primer 2:GTGTGTGTATGTGCGTGCTG