Insertion junction: CLIP2.002346_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002346
Chromosome:chromosome 6
Location:7102983
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g297850 DHC12,DHC1a,PCR4 (1 of 1) PF03028//PF07728//PF08393//PF12774//PF12775//PF12777//PF12780//PF12781 - Dynein heavy chain and region D6 of dynein motor (Dynein_heavy) // AAA domain (dynein-related subfamily) (AAA_5) // Dynein heavy chain, N-terminal region 2 (DHC_N2) // Hydrolytic ATP binding site of dynein motor region D1 (AAA_6) // P-loop containing dynein motor region D3 (AAA_7) // Microtubule-binding stalk of dynein motor (MT) // P-loop containing dynein motor region D4 (AAA_8) // ATP-binding dynein motor region D5 (AAA_9); inner arm dynein heavy chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGCAGAGGGCGCGTACTCGGACAGGAAGTGGTTGGTGACCTGGAA
Internal bar code:TGTTGACAGTCACCGTACAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCTCTCGCCCGTAGAAC
Suggested primer 2:CCTGGAACCCTTACGCGATT