Insertion junction: CLIP2.002347_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002347
Chromosome:chromosome 2
Location:3470538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098950 SYP72 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCCATGTCAGCTGTGCATACACAGCCCGGTTTGCGCGCTACAACTG
Internal bar code:CCTGATTTCATCATGGGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGCTTGAATTCCATCCG
Suggested primer 2:GAGCCCCTACATACGTCGTG