Insertion junction: CLIP2.002350_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002350
Chromosome:chromosome 13
Location:2939205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583600 DGD1 Digalactosyldiacylglycerol synthase; (1 of 1) 2.4.1.241 - Digalactosyldiacylglycerol synthase / UDP-galactose:MGDG galactosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCACAGCACCACAGCACATTAGGCACTGTCCTGCAACCCTGGTCTGC
Internal bar code:AGGCCTGACTTCAGCAACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2962
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGTTTGTTCACGGCAC
Suggested primer 2:CGATGCAGCTTCAATGCCTC