Insertion junction: CLIP2.002352_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002352
Chromosome:chromosome 13
Location:2857895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583100 (1 of 1) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGCCTCCCGCCGCAAACAACGGCCTGCCTCCGGGGGTGAAAGCC
Internal bar code:AGTCTAAATCTGTGGAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2926
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAACGACACCGAGAGCC
Suggested primer 2:GTGTTGATTTGCTGCGGCTG