Insertion junction: CLIP2.002354_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002354
Chromosome:chromosome 14
Location:848975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTGGTGATGCGGTGCTGGTGGTGGAGGTGATGGTGGTGGTGCGTGAT
Internal bar code:ACTGAAACTAAGCGCCGGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGCAACCCCACACACAC
Suggested primer 2:CCTTGGCAACAGCTGACAAC