Insertion junction: CLIP2.002365_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002365
Chromosome:chromosome 17
Location:2888804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718950 RCA2 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTCGTATCTTGTTTCAGGGTTAATGTCTAGCTCCAGACAAAAACGG
Internal bar code:GCAAAGTCGAATTCGTCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3957
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTATGCACCCTGTAGCCT
Suggested primer 2:ACGTGCACATGTGTTTGCTC