Insertion junction: CLIP2.002369_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002369
Chromosome:chromosome 2
Location:4376150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGATTTACAAGCGCATAAATGGGACTTGGTGGGACGCGGTACTTGGA
Internal bar code:GTCAGTAAGAGATTACATGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5432
LEAP-Seq percent confirming:99.2248
LEAP-Seq n confirming:128
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:CACACATGCGTTGACCGTTT
Suggested primer 2:ATGAGGGTGAGGGAGCAGAT