Insertion junction: CLIP2.002371_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002371
Chromosome:chromosome 12
Location:1653861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486600 MEX1 (1 of 1) PTHR34809//PTHR34809:SF1 - FAMILY NOT NAMED // MALTOSE EXCESS PROTEIN 1, CHLOROPLASTIC-RELATED; Maltose exporter-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGTTTGTTTGCAGGTATGTGCCTGCGCACCATCACCCCCGAGCTCAC
Internal bar code:TATAGGGGGTGGATGGCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2645
LEAP-Seq percent confirming:93.4783
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTCCGCGGTTGGATGAA
Suggested primer 2:AACGACCTGTACACGGTGAC