Insertion junction: CLIP2.002394_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002394
Chromosome:chromosome 3
Location:5543715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185200 CPL3,MPA6 (1 of 3) PTHR11668//PTHR11668:SF267 - SERINE/THREONINE PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED; protein ser/thr phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGCTCTGCCCACGTGGCACGTTTCAGCATGGCACGTTTCATTACAC
Internal bar code:TTCCAGAGGCCAATGTACAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3214
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAAGTTGTTGCGGCAGGC
Suggested primer 2:ACGCGTTAAGTTGTGCACAC