Insertion junction: CLIP2.002403_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002403
Chromosome:chromosome 3
Location:4412231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175100 (1 of 1) IPR013750//IPR016035 - GHMP kinase, C-terminal domain // Acyl transferase/acyl hydrolase/lysophospholipase 3'UTR
Cre03.g175200 TOC75 Translocon at the outer envelope membrane of chloroplasts, 75 kDa subunit; (1 of 2) PTHR12815//PTHR12815:SF7 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // OUTER ENVELOPE PROTEIN 80, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAAAGTGCTTGTTCATTCTCACATCGGCGAGCGGCAGCGTCTGCAGG
Internal bar code:CGGAAACCACAACAGTGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGAGAATACCCATGGC
Suggested primer 2:ATAGGATGAGGTGGGGTGCT