Insertion junction: CLIP2.002418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002418
Chromosome:chromosome 3
Location:4202878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173600 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTTGGGTCTTCAAGCCGTCGTCGCACTCTGCCCTGCATAAAAATAT
Internal bar code:GCGGGTCGGCCTTATGAATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:4145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACTCGATACCCATACA
Suggested primer 2:CATCGGCAAGTCATTCAGCG