Insertion junction: CLIP2.002424_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002424
Chromosome:chromosome 10
Location:4026053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGCTCTTGGTGGCTGCGCCTCCGAAGGTGAGGGGCGGTGCTTTTGTG
Internal bar code:AGATAACCGTGATTTATATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATTCTCTCCTGTCGCCC
Suggested primer 2:GATTCACGCCGCACACATAC