Insertion junction: CLIP2.002427_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002427
Chromosome:chromosome 5
Location:1856986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235650 (1 of 15) 3.4.21.72 - IgA-specific serine endopeptidase / Immunoglobulin A1 protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCTACGACTTCACTTCGTAAACTTAATGCGTGTAACCCCCCCCCCC
Internal bar code:AAACGTTGTAGGAATGGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2299
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGATTGTGGCTTTGGC
Suggested primer 2:CTGTGACCAGGGTGTTCCTC