Insertion junction: CLIP2.002431_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002431
Chromosome:chromosome 1
Location:2040856
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g011200 (1 of 1) PF04658 - TAFII55 protein conserved region (TAFII55_N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCAGTTTTGCATGCCGCGTTTGAAAGCTTGGGCCATGCAGCGGAAA
Internal bar code:GTAACGGGTGATAGGCATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGTAGCGCGGATGTTTG
Suggested primer 2:GCGCGATTCTAGCTCCTTCT