Insertion junction: CLIP2.002437_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002437
Chromosome:chromosome 1
Location:6909777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCCACCCACCACGCCACCGCCGCCACTGCGCGCCCTACAGGTTGCCA
Internal bar code:AGAGCATCACATGAAAAATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3142
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCGAGGGATACGGTGA
Suggested primer 2:ACTGTGCTGTGCAATGCTTG