Insertion junction: CLIP2.002439_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002439
Chromosome:chromosome 1
Location:1742675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009650 BUG25 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; basal body protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTGGGGGAGAGACAAAAGGAGGAGAGGTGCGTCTCCAGGGCAATGG
Internal bar code:CTGAACCTCTGGTCGTCAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1597
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGGACAGCGAGAAGTTG
Suggested primer 2:AGCAGCAGAGATAGCAGCAG