Insertion junction: CLIP2.002445_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002445
Chromosome:chromosome 12
Location:6313366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGTTGTTGTTATCGGGTCGGAACTAGGTTCGGCGCTTCGCAGGCCTG
Internal bar code:CAACGTGTGCCTCCACCCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCTCTACTCTCCCACTT
Suggested primer 2:AGGCAGGGATTGTGATGTGG