Insertion junction: CLIP2.002446_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002446
Chromosome:chromosome 15
Location:517208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636050 CPLD31 Conserved in the Plant Lineage and Diatoms; (1 of 2) PTHR35514//PTHR35514:SF1 - FAMILY NOT NAMED // THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGCCAGCACACGCAGCTTGAAGCCGGTGTCCTTCTCCAGGTTGGAT
Internal bar code:ATTCTAGGGCCTAAATATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:94.2029
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCTGCAACTACCTCAC
Suggested primer 2:CAAGCTCCTTGCAAACCCAC