Insertion junction: CLIP2.002462_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002462
Chromosome:chromosome 10
Location:1224556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426292 PYK6 (1 of 3) PTHR11817//PTHR11817:SF4 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCCCCGCCCGCTGTAGTGCTGCAGTGCCCCGCCCGCCTCCAGCTGC
Internal bar code:ACTCATTATAGCAAAGGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAACCTCAATACGGCCA
Suggested primer 2:AAGAGTGGGATGTTGGCGAG