Insertion junction: CLIP2.002465_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002465
Chromosome:chromosome 12
Location:9891292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541777 CGL95 (1 of 1) 2.1.1.259//2.1.1.43 - [Fructose-bisphosphate aldolase]-lysine N-methyltransferase / (dimerizing)]-lysine 6-N-methyltransferase // Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase; SET domain-containing protein 3'UTR
Cre12.g542202 (1 of 1) PTHR12149:SF8 - MGC174333 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGCGACGCCACACCGCGCGGATAGCATAGCCGATGGGCTGGCACGC
Internal bar code:GTTATTAAGGTCACATAGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1680
LEAP-Seq percent confirming:52.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAAGAAGGGCAGCAAG
Suggested primer 2:GCTGTATTAGCGGCTAGGCA