Insertion junction: CLIP2.002492_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002492
Chromosome:chromosome 3
Location:5000640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179650 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTGGCCGCCCGCGAGTTCGCGAGATGGAAAGCCCCGGTTACACAGAC
Internal bar code:TTTTACCACGAGCGCTGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3968
LEAP-Seq percent confirming:76.0563
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGAGCCCCAGTCCAAAG
Suggested primer 2:TTTGGGATAGGGGGAGGGAG