Insertion junction: CLIP2.002498_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002498
Chromosome:chromosome 6
Location:2566968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269650 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAATCCATGTTACCCGGTGACGCGGCCTTACCGCCACCATCCACCCC
Internal bar code:CAACGCGGTTAGGCCGGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2836
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGGGTTGTGTTCATTC
Suggested primer 2:GTGTGCGGTTTGACAGTGAC