Insertion junction: CLIP2.002504_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002504
Chromosome:chromosome 9
Location:2548839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392700 CGL39 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGGGCGGCCCATAAGCTATGGTGTGTTCTTCACTTTGGCACCGGGG
Internal bar code:GGGTATAGAATCATATACTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:GCTCACGAGTTACCCCTCAC